Camptotheca acuminata transcriptome

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Assembled from trimmed 2x54mers from:
camac_leaf_1
camac_leaf_2
camac_stem_1
camac_stem_2


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Sequences         53294
Bases          42979749
Minlen              100
Maxlen            19639
Length at Q1        150
Length at Q2        286
Length at Q3       1208
N50                1726
B1000             74.6%
B2000             40.6%

Longest 19639, 13981, 13677, 12860, 12175, 12013, 11350, 11200, 11005, 10581

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contigs.fa
Contigs from assembly, min. 100 bp.

peptides.fa
Peptide products predicted by ESTScan (best selected from 
Brassicaceae). May or may not include initial methionine.
There may be zero, one or multiple peptides reported per contig.

camac_leaf_1.counts
camac_leaf_2.counts
camac_stem_1.counts
camac_stem_2.counts
Read counts obtained by post hoc alignment of reads to reported contigs,
per sample. Tab-delimited columns with the format

 contig_id  all_aligned  unique_aligned  paired_aligned

where contig_id is the contig identifier, all_aligned is the number of
reads aligned to this contig, unique_aligned is the number of reads that
aligned uniquely to this contig, and paired_aligned is the number of
pairs aligned to this contig.