Huperzia squarrosa transcriptome

--

Assembled from trimmed 2x54mers from:
hupsq_shoot_tip

--

Sequences        145360
Bases          74537335
Minlen              100
Maxlen            14588
Length at Q1        122
Length at Q2        188
Length at Q3        491
N50                1339
B1000             59.3%
B2000             33.7%

Longest 14588, 13792, 12336, 11694, 11686, 11289, 11272, 11209, 10870, 10500

--

contigs.fa
Contigs from assembly, min. 100 bp.

peptides.fa
Peptide products predicted by ESTScan (best selected from 
Brassicaceae). May or may not include initial methionine.
There may be zero, one or multiple peptides reported per contig.

hupsq_shoot_tip.counts
Read counts obtained by post hoc alignment of reads to reported contigs,
per sample. Tab-delimited columns with the format

 contig_id  all_aligned  unique_aligned  paired_aligned

where contig_id is the contig identifier, all_aligned is the number of
reads aligned to this contig, unique_aligned is the number of reads that
aligned uniquely to this contig, and paired_aligned is the number of
pairs aligned to this contig.